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Matthew 17:9-13 meaning
The parallel gospel accounts of Matthew 17:9-13 are found in Mark 9:9-13 and Luke 9:36.
As Jesus, Peter, James, and John were coming down from the mountain after His transfiguration Jesus commanded them to keep secret what they had just witnessed, "Tell the vision to no one until the Son of Man has risen from the dead" (v 9). They were not to tell the other disciples or anyone else what they had seen until Jesus had risen from the dead.
After the Son of Man had risen they could tell anyone about this remarkable vision. But they did not tell anyone before then (Luke 9:36). The transfiguration was recorded in Matthew, Mark, and Luke and none of those authors were present when it occurred (Matthew 17:1-8; Mark 9:2-8; Luke 9:28-36). Peter and John who were both mention Christ's transfiguration directly and indirectly in their later writings.
"And the Word became flesh, and dwelt among us, and we saw His glory, glory as of the only begotten from the Father, full of grace and truth."
(John 1:14)
"For we did not follow cleverly devised tales when we made known to you the power and coming of our Lord Jesus Christ, but we were eyewitnesses of His majesty. For when He received honor and glory from God the Father, such an utterance as this was made to Him by the Majestic Glory, "This is My beloved Son with whom I am well-pleased"—and we ourselves heard this utterance made from heaven when we were with Him on the holy mountain."
(2 Peter 1:16-18)
But Jesus's transfiguration and what they witnessed was apparently on the disciples' mind as they came down from the mountain (v 9). And they discussed these thoughts with Jesus while they were alone with Him. Interestingly, what appears to have been the foremost thought on the disciples' mind concerned Elijah. By this point Peter, James, and John were fully convinced that Jesus was the Messiah. But it did not seem to register that Jesus, the Messiah, would be raised from the dead, even though He just told them plainly that He would be resurrected.
The reason for the disciples' confusion seems to result from the compounding of two false assumptions.
The first erroneous assumption was that the disciples appear to have presumed that the Messiah would come only once—not twice. They believed that He would come to usher in His kingdom at the end of the age, so since the Messiah was present, they presumed the age was about to end, and a new age would be ushered in where the Messiah would reign on the throne of David (2 Samuel 7:13). They seemed to have maintained this error until Jesus ascended into Heaven (Acts 1:6-9).
They did not yet comprehend that the Messiah would:
They seemed to believe that they were already in or at least very near the end times, and that Jesus had appeared now, to set up His physical kingdom on earth.
In one sense they were right. If Israel had accepted Jesus, that was what would have occurred. Jesus made this clear when He answered:
"And if you are willing to accept it, John himself is Elijah who was to come."
(Matthew 11:14)
This verse indicates that John the Baptist would have been a complete fulfillment of the ministry of Elijah as Jesus's forerunner—IF Israel had accepted Jesus as its Messiah.
However, it was predicted that Israel would reject Jesus as Messiah, as Jesus pointed out (Matthew 13:13-14). After Jesus ascended to heaven, Peter promised the people that if they would repent and believe, then Jesus would return and set up His kingdom on earth (Acts 3:19-20). So the gap of time could have been fairly short, had Israel believed. But that is not what happened, and not what was prophesied (Romans 11:12).
The Jews had noticed that there were Messianic prophecies and types of the Messiah both as a suffering servant, as well as a conquering king. Some even thought there might be two Messiahs. What they did not seem to be able to grasp was that their Messiah would come twice, in two advents. Once to serve, and die for the sins of all people. Then again to reign on the earth as its king. Incidentally, this Messianic pattern is what Jesus calls His followers to do. Humbly love and serve people through the sufferings and trials of this life and then reign with Him as servant kings in the next life.
The disciples believed that Elijah must appear also at the end times and that Elijah would come first, that is, before the Messiah came. They appear to have believed both of these would be the same event. To them Jesus's phrase until the Son of Man has risen from the dead (v 9) might have sounded like a vague reference to the end of the age—not Jesus's literal resurrection.
In addition to the assumption that Messiah would only come once, the disciples appear to have held a second false assumption, which was an erroneous conflation of the Son of Man with Elijah. When Jesus said "…until the Son of Man has risen from the dead," (v 9) the disciples seemed to have mistakenly believed that He was in some way referring to Elijah—who the disciples just saw (Matthew 17:3). Elijah was strongly associated in Jewish minds with both the Messiah and the resurrection. It seems they believed it was Elijah who would rise from the dead.
We have already shown the link between Elijah and the Messiah (Matthew 11:10-14, 16:14, 17:3). Isaiah prophesied about a forerunner to announce the coming of the Messiah and to prepare for His arrival: "A voice is calling 'Clear the way of the LORD in the wilderness; Make smooth in the desert a highway for our God'" (Isaiah 40:3). John the Baptist said this prophecy from Isaiah applied to him, while simultaneously maintaining he was not Elijah (John 1:21, 23). This was true because there would be two advents.
Malachi, too, spoke of this forerunning messenger and identified him as Elijah.
"'Behold, I am going to send My messenger, and he will clear the way before Me. And the Lord, whom you seek, will suddenly come to His temple; and the messenger of the covenant, in whom you delight, behold, He is coming,' says the Lord of hosts."
(Malachi 3:1)
"Behold, I am going to send you Elijah the prophet before the coming of the great and terrible day of the Lord. He will restore the hearts of the fathers to their children and the hearts of the children to their fathers, so that I will not come and smite the land with a curse."
(Malachi 4:5-6)
Even today when the Jews celebrate Passover, as they have done for thousands of years, they set out a place, pour a special cup, and leave the door open for Elijah to enter in the hope that he will announce the immanency of the Messiah's arrival.
But in addition to being a Messianic forerunner, the first century Jews also strongly associated Elijah with the resurrection from the dead. This association was perhaps in part from the fact that Elijah never died (2 Kings 2:11). But more than that, this association came from what the oral traditions said about Elijah and the resurrection.
In addition to the Hebrew scriptures that we know as the Old Testament, there was an oral tradition called "The Mishnah." According to the oral tradition itself, the Mishnah dates all the way back to the time of Moses. But many believe it began during the post-exilic era sometime between the time of Ezra (450 B.C.) and the time of Maccabees (150 B.C.). Centuries later (350 AD) the oral Mishnah was written down and became part of the Jewish "Talmud." Many of the ideas of the Mishnah were very much in circulation during Jesus's day.
This oral tradition taught, "and the resurrection of the dead comes from Elijah, blessed be his memory, Amen" (Mishnah: Sotah 9). This resurrection was generally believed to occur at the end of the age.
And so, it is plausible that when Peter, James, and John heard Jesus forbid them to tell no one what they saw until the Son of Man has risen from the dead (v 9) that they naturally and wrongly assumed Jesus was telling them not to speak of this until the end of the age when Elijah returns. They seemed to mistake Jesus's expression as a figure of speech for the end times, when Elijah oversees "the resurrection of the dead"—not Jesus's literal resurrection from the dead.
This might seem odd, but we have the benefit of now knowing Jesus died and was raised from the dead. So, looking back at what Jesus said it is easy for us (as it was later easy for them) to understand His actual meaning. There are numerous scriptures that tell us that the disciples only came to understand the scriptures, and what Jesus had told them, after He rose from the dead (Luke 24:24-34; Luke 24:44-45; John 2:22; Acts 1:16). But at the time, their false assumptions led them to wrongly interpret His meaning or prevented them from understanding some of the things He was teaching. We too carry assumptions, or perspectives, that can prevent us from understanding Jesus—that is why we must take every thought (including assumptions) captive to the obedience of Christ (2 Corinthians 10:5).
The disciples' two false assumptions were 1.) the Messiah would only come once, not twice; and 2.) Jesus is talking about Elijah, not Himself. These wrong suppositions/perspectives/ /assumptions were a big part of the reason why the disciples asked Jesus, "Why then do the scribes say that Elijah must come first?" (v 10).
Peter, James, and John in asking "Why then do the scribes say that Elijah must come first?" (v 10) were asking:
"How can Elijah come before You [Jesus] if he has not already come? The scribes say from the scriptures and traditions that Elijah must come before the Messiah, and You are clearly the Messiah, and You are already among us, but Elijah did not come first. And now You are telling us to wait to say anything until Elijah returns at the end of the age at the resurrection from the dead. How can these things be? Please explain these things to us, Jesus."
Jesus answered them by explaining that yes, Elijah is coming and will restore all things (v 11). In this statement Jesus affirmed the idea that Elijah would appear at the end times as the oral tradition and Malachi 4:5-6 suggested. It is possible that Elijah will be one of the two witnesses during the apocalypse (Revelation 11:3-13). Jesus assured the disciples that Elijah was still to come.
But in another very real sense, Elijah has come already. In making this claim, Jesus used His divine authority—But I say to you that Elijah already came (v 12). Jesus was speaking here of John the Baptist. The problem was, that they (the Pharisees, scribes, Sadducees, Herodians, etc.) did not recognize him as Elijah when he came (v 12). They did to him whatever they wished (v 12). They interrogated him (John 1:19-28, Matthew 3:7), they dismissed him (Matthew 11:7-8), they unjustly criticized him (Matthew 11:18), they imprisoned him (Matthew 4:12, 11:2, 14:3), and they killed him (Matthew 14:10).
Then the disciples understood that He had spoken to them about how Elijah was John the Baptist (v 13). John the Baptist came in the spirit and power of Elijah, but his message was rejected. Therefore, he did not fulfill the office, as John himself predicted would be the case (John 1:21).
But even as the Peter, James, and John understood that John the Baptist had served the Elijah-like role as the Messianic forerunner and that Elijah would come again and help restore all things at the end of the age, they did not seem to pick up on something else that Jesus said to them. And that was this: just as they (Pharisees, scribes, Sadducees, Herodians, etc.) did not recognize John the Baptist and abused and executed him, so also will they do to Jesus (v 12).
So also the Son of Man is going to suffer at their (Pharisees, scribes, Sadducees, Herodians, etc.) hands (v 12).
Jesus was again telling His disciples that even though He was the Messiah, that He would suffer and be killed by the authorities (Matthew 10:38, 16:4, 16:21, 16:24). Matthew's silence about the disciples' reaction to this comment suggests that this comment did not register with Peter, James, and John at this time.